Nucleotide Molecular Weights
Nucleotide | MW (g/mol) |
---|
Ribonucleotide Triphosphates (Avg. MW = 499.5) |
ATP | 507.2 |
CTP | 483.2 |
GTP | 523.2 |
UTP | 484.2 |
Ribonucleotide Monophosphates (Avg. MW = 339.5) |
AMP | 347.2 |
CMP | 323.2 |
GMP | 363.2 |
UMP | 324.2 |
Deoxyribonucleotide triphosphates (Avg. MW = 487.0) |
dATP | 491.2 |
dCTP | 467.2 |
dGTP | 507.2 |
dTTP | 482.2 |
Deoxyribonucleotide Monophosphates (Avg. MW = 327.0) |
dAMP | 331.2 |
dCMP | 307.2 |
dGMP | 347.2 |
dTMP | 322.2 |
Nucleic Acid Molecular Weight Conversions
Exact M.W. of ssRNA (e.g., RNA Transcript):
M.W. = (An x 329.2) + (Un x 306.2) + (Cn x 305.2) + (Gn x 345.2) + 159ª
An, Un, Cn, and Gn are the number of each respective nucleotide within the polynucleotide.
M.W. calculated is valid at physiological pH.
ªAddition of "159" to the M.W. takes into account the M.W. of a 5' triphosphate.
Exact M.W. of ssDNA (e.g., Oligonucleotides):
M.W. = (An x 313.2) + (Tn x 304.2) + (Cn x 289.2) + (Gn x 329.2) + 79.0ª
An, Tn, Cn, and Gn are the number of each respective nucleotide within the polynucleotide.
ªAddition of "79.0" to the M.W. takes into account the 5' monophosphate left by most restriction enzymes. No phosphate is present at the 5' end of strands made by primer extension.
Approximate M.W.'s of Nucleic Acids:
M.W. of ssRNA = (# nucleotides x 320.5) + 159.0
M.W. of ssDNA = (# nucleotides x 303.7) + 79.0
M.W. of dsDNA = (# nucleotides x 607.4) + 157.9
ssRNA Size and Mass Conversions
Size (nt) | Daltons or g/mol | 1 µg equivalent |
---|
pmol | molecules |
---|
20 | 6,569 | 152.23 | 9.17 x 1013 |
100 | 32,209 | 31.05 | 1.87 x 1013 |
300 | 96,309 | 10.38 | 6.25 x 1012 |
500 | 160,409 | 6.23 | 3.75 x 1012 |
1000 | 320,659 | 3.12 | 1.88 x 1012 |
1800 | 577,059 | 1.73 | 1.04 x 1012 |
ssDNA Size and Mass Conversions
Size (nt) | Daltons or g/mol | 1 µg equivalent |
---|
pmol | molecules |
---|
20 | 6,153 | 162.52 | 9.79 x 1013 |
100 | 30,449 | 32.84 | 1.98 x 1013 |
300 | 91,189 | 10.97 | 6.6 x 1012 |
500 | 151,929 | 6.58 | 3.96 x 1012 |
1000 | 303,779 | 3.29 | 1.98 x 1012 |
1800 | 546,739 | 1.83 | 1.1 x 1012 |
dsDNA Size and Mass Conversions
Size (nt) | Daltons or g/mol | 1 µg equivalent |
---|
pmol | molecules |
---|
20 | 12,306 | 81.26 | 4.89 x 1013 |
100 | 60,898 | 16.42 | 9.89 x 1012 |
300 | 182,378 | 5.48 | 3.3 x 1012 |
500 | 303,858 | 3.29 | 1.98 x 1012 |
1000 | 607,558 | 1.65 | 9.91 x 1011 |
1800 | 1,093,478 | 0.91 | 5.51 x 1011 |
Absorbance Units to Nucleic Acid Concentration Conversion
1 A260 dsDNA = 50 µg/ml
1 A260 ssDNA = 37 µg/ml
1 A260 ssRNA = 40 µg/ml
Nucleotide Absorbance Maxima and Molar Extinction Coefficients
Nucleotide | Absorbance Maximum at pH 7.0 (nm) | Molar Extinction Coefficient at pH 7.0 |
---|
ATP | 259 | 15,400 |
CTP | 271 | 9,000 |
GTP | 253 | 13,700 |
UTP | 262 | 10,000 |
dATP | 259 | 15,200 |
dCTP | 271 | 9,300 |
dGTP | 253 | 13,700 |
dTTP | 267 | 9,600 |